../LINKS -f K12illumina-baseline.fa -s K12_R.fof -b RK12links1 -d 500 -t $2 -k $1
../LINKS -f RK12links1.scaffolds.fa -s K12_R.fof -b RK12links2 -r RK12links1.bloom -d 750 -t $2 -k $1
../LINKS -f RK12links2.scaffolds.fa -s K12_R.fof -b RK12links3 -r RK12links1.bloom -d 1000 -t $2 -k $1
../LINKS -f RK12links3.scaffolds.fa -s K12_R.fof -b RK12links4 -r RK12links1.bloom -d 1250 -t $2 -k $1
../LINKS -f RK12links4.scaffolds.fa -s K12_R.fof -b RK12links5 -r RK12links1.bloom -d 1500 -t $2 -k $1
../LINKS -f RK12links5.scaffolds.fa -s K12_R.fof -b RK12links6 -r RK12links1.bloom -d 1750 -t $2 -k $1
../LINKS -f RK12links6.scaffolds.fa -s K12_R.fof -b RK12links7 -r RK12links1.bloom -d 3000 -t $2 -k $1
../LINKS -f RK12links7.scaffolds.fa -s K12_R.fof -b RK12links8 -r RK12links1.bloom -d 3250 -t $2 -k $1
../LINKS -f RK12links8.scaffolds.fa -s K12_R.fof -b RK12links9 -r RK12links1.bloom -d 3500 -t $2 -k $1
../LINKS -f RK12links9.scaffolds.fa -s K12_R.fof -b RK12links10 -r RK12links1.bloom -d 3750 -t $2 -k $1
../LINKS -f RK12links10.scaffolds.fa -s K12_R.fof -b RK12links11 -r RK12links1.bloom -d 4000 -t $2 -k $1
../LINKS -f RK12links11.scaffolds.fa -s K12_R.fof -b RK12links12 -r RK12links1.bloom -d 4500 -t $2 -k $1
../LINKS -f RK12links12.scaffolds.fa -s K12_R.fof -b RK12links13 -r RK12links1.bloom -d 4750 -t $2 -k $1
../LINKS -f RK12links13.scaffolds.fa -s K12_R.fof -b RK12links14 -r RK12links1.bloom -d 5000 -t $2 -k $1
../LINKS -f RK12links14.scaffolds.fa -s K12_R.fof -b RK12links15 -r RK12links1.bloom -d 5250 -t $2 -k $1
../LINKS -f RK12links15.scaffolds.fa -s K12_R.fof -b RK12links16 -r RK12links1.bloom -d 5500 -t $2 -k $1
../LINKS -f RK12links16.scaffolds.fa -s K12_R.fof -b RK12links17 -r RK12links1.bloom -d 5750 -t $2 -k $1
../LINKS -f RK12links17.scaffolds.fa -s K12_R.fof -b RK12links18 -r RK12links1.bloom -d 6000 -t $2 -k $1
../LINKS -f RK12links18.scaffolds.fa -s K12_R.fof -b RK12links19 -r RK12links1.bloom -d 6250 -t $2 -k $1
../LINKS -f RK12links19.scaffolds.fa -s K12_R.fof -b RK12links20 -r RK12links1.bloom -d 6500 -t $2 -k $1
../LINKS -f RK12links20.scaffolds.fa -s K12_R.fof -b RK12links21 -r RK12links1.bloom -d 7000 -t $2 -k $1
../LINKS -f RK12links21.scaffolds.fa -s K12_R.fof -b RK12links22 -r RK12links1.bloom -d 8000 -t $2 -k $1
../LINKS -f RK12links22.scaffolds.fa -s K12_R.fof -b RK12links23 -r RK12links1.bloom -d 9000 -t $2 -k $1
../LINKS -f RK12links23.scaffolds.fa -s K12_R.fof -b RK12links24 -r RK12links1.bloom -d 10000 -t $2 -k $1
../LINKS -f RK12links24.scaffolds.fa -s K12_R.fof -b RK12links25 -r RK12links1.bloom -d 11000 -t $2 -k $1
../LINKS -f RK12links25.scaffolds.fa -s K12_R.fof -b RK12links26 -r RK12links1.bloom -d 12000 -t $2 -k $1
../LINKS -f RK12links26.scaffolds.fa -s K12_R.fof -b RK12links27 -r RK12links1.bloom -d 13000 -t $2 -k $1
../LINKS -f RK12links27.scaffolds.fa -s K12_R.fof -b RK12links28 -r RK12links1.bloom -d 14000 -t $2 -k $1
../LINKS -f RK12links28.scaffolds.fa -s K12_R.fof -b RK12links29 -r RK12links1.bloom -d 15000 -t $2 -k $1
../LINKS -f RK12links29.scaffolds.fa -s K12_R.fof -b RK12links30 -r RK12links1.bloom -d 16000 -t $2 -k $1
