multitalent/playground/ALEGRA/find_starting_budget/inference_commands.sh
bsub -q gpu -gpu num=1:j_exclusive=yes:gmem=33G -L /bin/bash "source ~/load_env_cluster4.sh && multitalent_predict -d 980 -c 3d_fullres -tr nnUNetTrainer_airwayAug_new -i /dkfz/cluster/gpu/data/OE0441/isensee/nnUNet_raw/nnUNet_raw_remake/Dataset980_ALEGRA_fullyAnnotated/imagesVal -f 0 -o /dkfz/cluster/gpu/data/OE0441/isensee/nnUNet_raw/nnUNet_raw_remake/Dataset980_ALEGRA_fullyAnnotated/imagesVal_pred_980_3d_fullres_nnUNetTrainer_airwayAug_new_f0"
bsub -q gpu -gpu num=1:j_exclusive=yes:gmem=33G -L /bin/bash "source ~/load_env_cluster4.sh && multitalent_predict -d 980 -c 3d_fullres -tr nnUNetTrainer_airwayAug_new -i /dkfz/cluster/gpu/data/OE0441/isensee/nnUNet_raw/nnUNet_raw_remake/Dataset980_ALEGRA_fullyAnnotated/imagesVal -f 1 -o /dkfz/cluster/gpu/data/OE0441/isensee/nnUNet_raw/nnUNet_raw_remake/Dataset980_ALEGRA_fullyAnnotated/imagesVal_pred_980_3d_fullres_nnUNetTrainer_airwayAug_new_f1"
bsub -q gpu -gpu num=1:j_exclusive=yes:gmem=33G -L /bin/bash "source ~/load_env_cluster4.sh && multitalent_predict -d 980 -c 3d_fullres -tr nnUNetTrainer_airwayAug_new -i /dkfz/cluster/gpu/data/OE0441/isensee/nnUNet_raw/nnUNet_raw_remake/Dataset980_ALEGRA_fullyAnnotated/imagesVal -f 2 -o /dkfz/cluster/gpu/data/OE0441/isensee/nnUNet_raw/nnUNet_raw_remake/Dataset980_ALEGRA_fullyAnnotated/imagesVal_pred_980_3d_fullres_nnUNetTrainer_airwayAug_new_f2"
bsub -q gpu -gpu num=1:j_exclusive=yes:gmem=33G -L /bin/bash "source ~/load_env_cluster4.sh && multitalent_predict -d 980 -c 3d_fullres -tr nnUNetTrainer_airwayAug_new -i /dkfz/cluster/gpu/data/OE0441/isensee/nnUNet_raw/nnUNet_raw_remake/Dataset980_ALEGRA_fullyAnnotated/imagesVal -f 3 -o /dkfz/cluster/gpu/data/OE0441/isensee/nnUNet_raw/nnUNet_raw_remake/Dataset980_ALEGRA_fullyAnnotated/imagesVal_pred_980_3d_fullres_nnUNetTrainer_airwayAug_new_f3"
bsub -q gpu -gpu num=1:j_exclusive=yes:gmem=33G -L /bin/bash "source ~/load_env_cluster4.sh && multitalent_predict -d 980 -c 3d_fullres -tr nnUNetTrainer_airwayAug_new -i /dkfz/cluster/gpu/data/OE0441/isensee/nnUNet_raw/nnUNet_raw_remake/Dataset980_ALEGRA_fullyAnnotated/imagesVal -f 4 -o /dkfz/cluster/gpu/data/OE0441/isensee/nnUNet_raw/nnUNet_raw_remake/Dataset980_ALEGRA_fullyAnnotated/imagesVal_pred_980_3d_fullres_nnUNetTrainer_airwayAug_new_f4"
bsub -q gpu -gpu num=1:j_exclusive=yes:gmem=33G -L /bin/bash "source ~/load_env_cluster4.sh && multitalent_predict -d 980 -c 3d_fullres -tr nnUNetTrainer_airwayAug_new -i /dkfz/cluster/gpu/data/OE0441/isensee/nnUNet_raw/nnUNet_raw_remake/Dataset980_ALEGRA_fullyAnnotated/imagesVal -f 5 -o /dkfz/cluster/gpu/data/OE0441/isensee/nnUNet_raw/nnUNet_raw_remake/Dataset980_ALEGRA_fullyAnnotated/imagesVal_pred_980_3d_fullres_nnUNetTrainer_airwayAug_new_f5"
bsub -q gpu -gpu num=1:j_exclusive=yes:gmem=33G -L /bin/bash "source ~/load_env_cluster4.sh && multitalent_predict -d 980 -c 3d_fullres -tr nnUNetTrainer_airwayAug_new -i /dkfz/cluster/gpu/data/OE0441/isensee/nnUNet_raw/nnUNet_raw_remake/Dataset980_ALEGRA_fullyAnnotated/imagesVal -f 6 -o /dkfz/cluster/gpu/data/OE0441/isensee/nnUNet_raw/nnUNet_raw_remake/Dataset980_ALEGRA_fullyAnnotated/imagesVal_pred_980_3d_fullres_nnUNetTrainer_airwayAug_new_f6"
bsub -q gpu -gpu num=1:j_exclusive=yes:gmem=33G -L /bin/bash "source ~/load_env_cluster4.sh && multitalent_predict -d 980 -c 3d_fullres -tr nnUNetTrainer_airwayAug_new -i /dkfz/cluster/gpu/data/OE0441/isensee/nnUNet_raw/nnUNet_raw_remake/Dataset980_ALEGRA_fullyAnnotated/imagesVal -f 7 -o /dkfz/cluster/gpu/data/OE0441/isensee/nnUNet_raw/nnUNet_raw_remake/Dataset980_ALEGRA_fullyAnnotated/imagesVal_pred_980_3d_fullres_nnUNetTrainer_airwayAug_new_f7"
bsub -q gpu -gpu num=1:j_exclusive=yes:gmem=33G -L /bin/bash "source ~/load_env_cluster4.sh && multitalent_predict -d 980 -c 3d_fullres -tr nnUNetTrainer_airwayAug_new -i /dkfz/cluster/gpu/data/OE0441/isensee/nnUNet_raw/nnUNet_raw_remake/Dataset980_ALEGRA_fullyAnnotated/imagesVal -f 8 -o /dkfz/cluster/gpu/data/OE0441/isensee/nnUNet_raw/nnUNet_raw_remake/Dataset980_ALEGRA_fullyAnnotated/imagesVal_pred_980_3d_fullres_nnUNetTrainer_airwayAug_new_f8"
bsub -q gpu -gpu num=1:j_exclusive=yes:gmem=33G -L /bin/bash "source ~/load_env_cluster4.sh && multitalent_predict -d 980 -c 3d_fullres -tr nnUNetTrainer_airwayAug_new -i /dkfz/cluster/gpu/data/OE0441/isensee/nnUNet_raw/nnUNet_raw_remake/Dataset980_ALEGRA_fullyAnnotated/imagesVal -f 9 -o /dkfz/cluster/gpu/data/OE0441/isensee/nnUNet_raw/nnUNet_raw_remake/Dataset980_ALEGRA_fullyAnnotated/imagesVal_pred_980_3d_fullres_nnUNetTrainer_airwayAug_new_f9"
bsub -q gpu -gpu num=1:j_exclusive=yes:gmem=33G -L /bin/bash "source ~/load_env_cluster4.sh && multitalent_predict -d 980 -c 3d_fullres -tr nnUNetTrainer_airwayAug_new -i /dkfz/cluster/gpu/data/OE0441/isensee/nnUNet_raw/nnUNet_raw_remake/Dataset980_ALEGRA_fullyAnnotated/imagesVal -f 10 -o /dkfz/cluster/gpu/data/OE0441/isensee/nnUNet_raw/nnUNet_raw_remake/Dataset980_ALEGRA_fullyAnnotated/imagesVal_pred_980_3d_fullres_nnUNetTrainer_airwayAug_new_f10"
bsub -q gpu -gpu num=1:j_exclusive=yes:gmem=33G -L /bin/bash "source ~/load_env_cluster4.sh && multitalent_predict -d 980 -c 3d_fullres -tr nnUNetTrainer_airwayAug_new -i /dkfz/cluster/gpu/data/OE0441/isensee/nnUNet_raw/nnUNet_raw_remake/Dataset980_ALEGRA_fullyAnnotated/imagesVal -f 11 -o /dkfz/cluster/gpu/data/OE0441/isensee/nnUNet_raw/nnUNet_raw_remake/Dataset980_ALEGRA_fullyAnnotated/imagesVal_pred_980_3d_fullres_nnUNetTrainer_airwayAug_new_f11"
bsub -q gpu -gpu num=1:j_exclusive=yes:gmem=33G -L /bin/bash "source ~/load_env_cluster4.sh && multitalent_predict -d 980 -c 3d_fullres -tr nnUNetTrainer_airwayAug_new -i /dkfz/cluster/gpu/data/OE0441/isensee/nnUNet_raw/nnUNet_raw_remake/Dataset980_ALEGRA_fullyAnnotated/imagesVal -f 12 -o /dkfz/cluster/gpu/data/OE0441/isensee/nnUNet_raw/nnUNet_raw_remake/Dataset980_ALEGRA_fullyAnnotated/imagesVal_pred_980_3d_fullres_nnUNetTrainer_airwayAug_new_f12"
bsub -q gpu -gpu num=1:j_exclusive=yes:gmem=33G -L /bin/bash "source ~/load_env_cluster4.sh && multitalent_predict -d 980 -c 3d_fullres -tr nnUNetTrainer_airwayAug_new -i /dkfz/cluster/gpu/data/OE0441/isensee/nnUNet_raw/nnUNet_raw_remake/Dataset980_ALEGRA_fullyAnnotated/imagesVal -f 13 -o /dkfz/cluster/gpu/data/OE0441/isensee/nnUNet_raw/nnUNet_raw_remake/Dataset980_ALEGRA_fullyAnnotated/imagesVal_pred_980_3d_fullres_nnUNetTrainer_airwayAug_new_f13"
bsub -q gpu -gpu num=1:j_exclusive=yes:gmem=33G -L /bin/bash "source ~/load_env_cluster4.sh && multitalent_predict -d 980 -c 3d_fullres -tr nnUNetTrainer_airwayAug_new -i /dkfz/cluster/gpu/data/OE0441/isensee/nnUNet_raw/nnUNet_raw_remake/Dataset980_ALEGRA_fullyAnnotated/imagesVal -f 14 -o /dkfz/cluster/gpu/data/OE0441/isensee/nnUNet_raw/nnUNet_raw_remake/Dataset980_ALEGRA_fullyAnnotated/imagesVal_pred_980_3d_fullres_nnUNetTrainer_airwayAug_new_f14"
bsub -q gpu -gpu num=1:j_exclusive=yes:gmem=33G -L /bin/bash "source ~/load_env_cluster4.sh && multitalent_predict -d 980 -c 3d_fullres -tr nnUNetTrainer_airwayAug_new -i /dkfz/cluster/gpu/data/OE0441/isensee/nnUNet_raw/nnUNet_raw_remake/Dataset980_ALEGRA_fullyAnnotated/imagesVal -f all -o /dkfz/cluster/gpu/data/OE0441/isensee/nnUNet_raw/nnUNet_raw_remake/Dataset980_ALEGRA_fullyAnnotated/imagesVal_pred_980_3d_fullres_nnUNetTrainer_airwayAug_new_fall"
bsub -q gpu -gpu num=1:j_exclusive=yes:gmem=33G -L /bin/bash "source ~/load_env_cluster4.sh && multitalent_predict -d 980 -c 3d_fullres -tr nnUNetTrainer_airwayAug_new_noSmooth -i /dkfz/cluster/gpu/data/OE0441/isensee/nnUNet_raw/nnUNet_raw_remake/Dataset980_ALEGRA_fullyAnnotated/imagesVal -f all -o /dkfz/cluster/gpu/data/OE0441/isensee/nnUNet_raw/nnUNet_raw_remake/Dataset980_ALEGRA_fullyAnnotated/imagesVal_pred_980_3d_fullres_nnUNetTrainer_airwayAug_new_noSmooth_fall"

bsub -q gpu -gpu num=1:j_exclusive=yes:gmem=33G -L /bin/bash "source ~/load_env_cluster4.sh && multitalent_predict -d 981 -c 3d_fullres -tr nnUNetTrainer_airwayAug_new_noSmooth -i /dkfz/cluster/gpu/data/OE0441/isensee/nnUNet_raw/nnUNet_raw_remake/Dataset980_ALEGRA_fullyAnnotated/imagesVal -f all -o /dkfz/cluster/gpu/data/OE0441/isensee/nnUNet_raw/nnUNet_raw_remake/Dataset980_ALEGRA_fullyAnnotated/imagesVal_pred_981_3d_fullres_nnUNetTrainer_airwayAug_new_noSmooth_fall"
bsub -q gpu -gpu num=1:j_exclusive=yes:gmem=33G -L /bin/bash "source ~/load_env_cluster4.sh && multitalent_predict -d 982 -c 3d_fullres -tr nnUNetTrainer_airwayAug_new_noSmooth -i /dkfz/cluster/gpu/data/OE0441/isensee/nnUNet_raw/nnUNet_raw_remake/Dataset980_ALEGRA_fullyAnnotated/imagesVal -f all -o /dkfz/cluster/gpu/data/OE0441/isensee/nnUNet_raw/nnUNet_raw_remake/Dataset980_ALEGRA_fullyAnnotated/imagesVal_pred_982_3d_fullres_nnUNetTrainer_airwayAug_new_noSmooth_fall"
bsub -q gpu -gpu num=1:j_exclusive=yes:gmem=33G -L /bin/bash "source ~/load_env_cluster4.sh && multitalent_predict -d 983 -c 3d_fullres -tr nnUNetTrainer_airwayAug_new_noSmooth -i /dkfz/cluster/gpu/data/OE0441/isensee/nnUNet_raw/nnUNet_raw_remake/Dataset980_ALEGRA_fullyAnnotated/imagesVal -f all -o /dkfz/cluster/gpu/data/OE0441/isensee/nnUNet_raw/nnUNet_raw_remake/Dataset980_ALEGRA_fullyAnnotated/imagesVal_pred_983_3d_fullres_nnUNetTrainer_airwayAug_new_noSmooth_fall"
bsub -q gpu -gpu num=1:j_exclusive=yes:gmem=33G -L /bin/bash "source ~/load_env_cluster4.sh && multitalent_predict -d 984 -c 3d_fullres -tr nnUNetTrainer_airwayAug_new_noSmooth -i /dkfz/cluster/gpu/data/OE0441/isensee/nnUNet_raw/nnUNet_raw_remake/Dataset980_ALEGRA_fullyAnnotated/imagesVal -f all -o /dkfz/cluster/gpu/data/OE0441/isensee/nnUNet_raw/nnUNet_raw_remake/Dataset980_ALEGRA_fullyAnnotated/imagesVal_pred_984_3d_fullres_nnUNetTrainer_airwayAug_new_noSmooth_fall"

bsub -q gpu -gpu num=1:j_exclusive=yes:gmem=33G -L /bin/bash "source ~/load_env_cluster4.sh && multitalent_predict -d 981 -c 3d_fullres -tr nnUNetTrainer_airwayAug_new_noSmooth_betterIgnSampling -i /dkfz/cluster/gpu/data/OE0441/isensee/nnUNet_raw/nnUNet_raw_remake/Dataset980_ALEGRA_fullyAnnotated/imagesVal -f all -o /dkfz/cluster/gpu/data/OE0441/isensee/nnUNet_raw/nnUNet_raw_remake/Dataset980_ALEGRA_fullyAnnotated/imagesVal_pred_981_3d_fullres_nnUNetTrainer_airwayAug_new_noSmooth_betterIgnSampling_fall"
bsub -q gpu -gpu num=1:j_exclusive=yes:gmem=33G -L /bin/bash "source ~/load_env_cluster4.sh && multitalent_predict -d 982 -c 3d_fullres -tr nnUNetTrainer_airwayAug_new_noSmooth_betterIgnSampling -i /dkfz/cluster/gpu/data/OE0441/isensee/nnUNet_raw/nnUNet_raw_remake/Dataset980_ALEGRA_fullyAnnotated/imagesVal -f all -o /dkfz/cluster/gpu/data/OE0441/isensee/nnUNet_raw/nnUNet_raw_remake/Dataset980_ALEGRA_fullyAnnotated/imagesVal_pred_982_3d_fullres_nnUNetTrainer_airwayAug_new_noSmooth_betterIgnSampling_fall"

bsub -q gpu -gpu num=1:j_exclusive=yes:gmem=1G -L /bin/bash "source ~/load_env_cluster4.sh && multitalent_predict -d 983 -c 3d_fullres -tr nnUNetTrainer_airwayAug_new_noSmooth_betterIgnSampling -i /dkfz/cluster/gpu/data/OE0441/isensee/nnUNet_raw/nnUNet_raw_remake/Dataset980_ALEGRA_fullyAnnotated/imagesVal -f all -o /dkfz/cluster/gpu/data/OE0441/isensee/nnUNet_raw/nnUNet_raw_remake/Dataset980_ALEGRA_fullyAnnotated/imagesVal_pred_983_3d_fullres_nnUNetTrainer_airwayAug_new_noSmooth_betterIgnSampling_fall -num_parts 4 -part_id 0 --continue_prediction"
bsub -q gpu -gpu num=1:j_exclusive=yes:gmem=1G -L /bin/bash "source ~/load_env_cluster4.sh && multitalent_predict -d 983 -c 3d_fullres -tr nnUNetTrainer_airwayAug_new_noSmooth_betterIgnSampling -i /dkfz/cluster/gpu/data/OE0441/isensee/nnUNet_raw/nnUNet_raw_remake/Dataset980_ALEGRA_fullyAnnotated/imagesVal -f all -o /dkfz/cluster/gpu/data/OE0441/isensee/nnUNet_raw/nnUNet_raw_remake/Dataset980_ALEGRA_fullyAnnotated/imagesVal_pred_983_3d_fullres_nnUNetTrainer_airwayAug_new_noSmooth_betterIgnSampling_fall -num_parts 4 -part_id 1 --continue_prediction"
bsub -q gpu -gpu num=1:j_exclusive=yes:gmem=1G -L /bin/bash "source ~/load_env_cluster4.sh && multitalent_predict -d 983 -c 3d_fullres -tr nnUNetTrainer_airwayAug_new_noSmooth_betterIgnSampling -i /dkfz/cluster/gpu/data/OE0441/isensee/nnUNet_raw/nnUNet_raw_remake/Dataset980_ALEGRA_fullyAnnotated/imagesVal -f all -o /dkfz/cluster/gpu/data/OE0441/isensee/nnUNet_raw/nnUNet_raw_remake/Dataset980_ALEGRA_fullyAnnotated/imagesVal_pred_983_3d_fullres_nnUNetTrainer_airwayAug_new_noSmooth_betterIgnSampling_fall -num_parts 4 -part_id 2 --continue_prediction"
bsub -q gpu -gpu num=1:j_exclusive=yes:gmem=1G -L /bin/bash "source ~/load_env_cluster4.sh && multitalent_predict -d 983 -c 3d_fullres -tr nnUNetTrainer_airwayAug_new_noSmooth_betterIgnSampling -i /dkfz/cluster/gpu/data/OE0441/isensee/nnUNet_raw/nnUNet_raw_remake/Dataset980_ALEGRA_fullyAnnotated/imagesVal -f all -o /dkfz/cluster/gpu/data/OE0441/isensee/nnUNet_raw/nnUNet_raw_remake/Dataset980_ALEGRA_fullyAnnotated/imagesVal_pred_983_3d_fullres_nnUNetTrainer_airwayAug_new_noSmooth_betterIgnSampling_fall -num_parts 4 -part_id 3 --continue_prediction"

bsub -q gpu -gpu num=1:j_exclusive=yes:gmem=33G -L /bin/bash "source ~/load_env_cluster4.sh && multitalent_predict -d 984 -c 3d_fullres -tr nnUNetTrainer_airwayAug_new_noSmooth_betterIgnSampling -i /dkfz/cluster/gpu/data/OE0441/isensee/nnUNet_raw/nnUNet_raw_remake/Dataset980_ALEGRA_fullyAnnotated/imagesVal -f all -o /dkfz/cluster/gpu/data/OE0441/isensee/nnUNet_raw/nnUNet_raw_remake/Dataset980_ALEGRA_fullyAnnotated/imagesVal_pred_984_3d_fullres_nnUNetTrainer_airwayAug_new_noSmooth_betterIgnSampling_fall"
