fsl_glm -i /corral-repl/utexas/poldracklab/openfmri/analyses/paper_analysis_Dec2012/data_prep//zstat_run1_add10000.nii.gz -d /corral-repl/utexas/poldracklab/openfmri/analyses/paper_analysis_Dec2012/ICA_smoothed_6mm//ica_run1_2comp/melodic_IC.nii.gz -o /corral-repl/utexas/poldracklab/openfmri/analyses/paper_analysis_Dec2012/ICA_smoothed_6mm//datarun1_icarun1_2comp.txt --demean -m /corral-repl/utexas/poldracklab/software_lonestar/fsl-5.0.1/data/standard/MNI152_T1_2mm_brain_mask.nii.gz
fsl_glm -i /corral-repl/utexas/poldracklab/openfmri/analyses/paper_analysis_Dec2012/data_prep//zstat_run1_add10000.nii.gz -d /corral-repl/utexas/poldracklab/openfmri/analyses/paper_analysis_Dec2012/ICA_smoothed_6mm//ica_run1_10comp/melodic_IC.nii.gz -o /corral-repl/utexas/poldracklab/openfmri/analyses/paper_analysis_Dec2012/ICA_smoothed_6mm//datarun1_icarun1_10comp.txt --demean -m /corral-repl/utexas/poldracklab/software_lonestar/fsl-5.0.1/data/standard/MNI152_T1_2mm_brain_mask.nii.gz
fsl_glm -i /corral-repl/utexas/poldracklab/openfmri/analyses/paper_analysis_Dec2012/data_prep//zstat_run1_add10000.nii.gz -d /corral-repl/utexas/poldracklab/openfmri/analyses/paper_analysis_Dec2012/ICA_smoothed_6mm//ica_run1_20comp/melodic_IC.nii.gz -o /corral-repl/utexas/poldracklab/openfmri/analyses/paper_analysis_Dec2012/ICA_smoothed_6mm//datarun1_icarun1_20comp.txt --demean -m /corral-repl/utexas/poldracklab/software_lonestar/fsl-5.0.1/data/standard/MNI152_T1_2mm_brain_mask.nii.gz
fsl_glm -i /corral-repl/utexas/poldracklab/openfmri/analyses/paper_analysis_Dec2012/data_prep//zstat_run1_add10000.nii.gz -d /corral-repl/utexas/poldracklab/openfmri/analyses/paper_analysis_Dec2012/ICA_smoothed_6mm//ica_run1_50comp/melodic_IC.nii.gz -o /corral-repl/utexas/poldracklab/openfmri/analyses/paper_analysis_Dec2012/ICA_smoothed_6mm//datarun1_icarun1_50comp.txt --demean -m /corral-repl/utexas/poldracklab/software_lonestar/fsl-5.0.1/data/standard/MNI152_T1_2mm_brain_mask.nii.gz
fsl_glm -i /corral-repl/utexas/poldracklab/openfmri/analyses/paper_analysis_Dec2012/data_prep//zstat_run1_add10000.nii.gz -d /corral-repl/utexas/poldracklab/openfmri/analyses/paper_analysis_Dec2012/ICA_smoothed_6mm//ica_run1_100comp/melodic_IC.nii.gz -o /corral-repl/utexas/poldracklab/openfmri/analyses/paper_analysis_Dec2012/ICA_smoothed_6mm//datarun1_icarun1_100comp.txt --demean -m /corral-repl/utexas/poldracklab/software_lonestar/fsl-5.0.1/data/standard/MNI152_T1_2mm_brain_mask.nii.gz
fsl_glm -i /corral-repl/utexas/poldracklab/openfmri/analyses/paper_analysis_Dec2012/data_prep//zstat_run1_add10000.nii.gz -d /corral-repl/utexas/poldracklab/openfmri/analyses/paper_analysis_Dec2012/ICA_smoothed_6mm//ica_run1_200comp/melodic_IC.nii.gz -o /corral-repl/utexas/poldracklab/openfmri/analyses/paper_analysis_Dec2012/ICA_smoothed_6mm//datarun1_icarun1_200comp.txt --demean -m /corral-repl/utexas/poldracklab/software_lonestar/fsl-5.0.1/data/standard/MNI152_T1_2mm_brain_mask.nii.gz
fsl_glm -i /corral-repl/utexas/poldracklab/openfmri/analyses/paper_analysis_Dec2012/data_prep//zstat_run2_add10000.nii.gz -d /corral-repl/utexas/poldracklab/openfmri/analyses/paper_analysis_Dec2012/ICA_smoothed_6mm//ica_run1_2comp/melodic_IC.nii.gz -o /corral-repl/utexas/poldracklab/openfmri/analyses/paper_analysis_Dec2012/ICA_smoothed_6mm//datarun2_icarun1_2comp.txt --demean -m /corral-repl/utexas/poldracklab/software_lonestar/fsl-5.0.1/data/standard/MNI152_T1_2mm_brain_mask.nii.gz
fsl_glm -i /corral-repl/utexas/poldracklab/openfmri/analyses/paper_analysis_Dec2012/data_prep//zstat_run2_add10000.nii.gz -d /corral-repl/utexas/poldracklab/openfmri/analyses/paper_analysis_Dec2012/ICA_smoothed_6mm//ica_run1_10comp/melodic_IC.nii.gz -o /corral-repl/utexas/poldracklab/openfmri/analyses/paper_analysis_Dec2012/ICA_smoothed_6mm//datarun2_icarun1_10comp.txt --demean -m /corral-repl/utexas/poldracklab/software_lonestar/fsl-5.0.1/data/standard/MNI152_T1_2mm_brain_mask.nii.gz
fsl_glm -i /corral-repl/utexas/poldracklab/openfmri/analyses/paper_analysis_Dec2012/data_prep//zstat_run2_add10000.nii.gz -d /corral-repl/utexas/poldracklab/openfmri/analyses/paper_analysis_Dec2012/ICA_smoothed_6mm//ica_run1_20comp/melodic_IC.nii.gz -o /corral-repl/utexas/poldracklab/openfmri/analyses/paper_analysis_Dec2012/ICA_smoothed_6mm//datarun2_icarun1_20comp.txt --demean -m /corral-repl/utexas/poldracklab/software_lonestar/fsl-5.0.1/data/standard/MNI152_T1_2mm_brain_mask.nii.gz
fsl_glm -i /corral-repl/utexas/poldracklab/openfmri/analyses/paper_analysis_Dec2012/data_prep//zstat_run2_add10000.nii.gz -d /corral-repl/utexas/poldracklab/openfmri/analyses/paper_analysis_Dec2012/ICA_smoothed_6mm//ica_run1_50comp/melodic_IC.nii.gz -o /corral-repl/utexas/poldracklab/openfmri/analyses/paper_analysis_Dec2012/ICA_smoothed_6mm//datarun2_icarun1_50comp.txt --demean -m /corral-repl/utexas/poldracklab/software_lonestar/fsl-5.0.1/data/standard/MNI152_T1_2mm_brain_mask.nii.gz
fsl_glm -i /corral-repl/utexas/poldracklab/openfmri/analyses/paper_analysis_Dec2012/data_prep//zstat_run2_add10000.nii.gz -d /corral-repl/utexas/poldracklab/openfmri/analyses/paper_analysis_Dec2012/ICA_smoothed_6mm//ica_run1_100comp/melodic_IC.nii.gz -o /corral-repl/utexas/poldracklab/openfmri/analyses/paper_analysis_Dec2012/ICA_smoothed_6mm//datarun2_icarun1_100comp.txt --demean -m /corral-repl/utexas/poldracklab/software_lonestar/fsl-5.0.1/data/standard/MNI152_T1_2mm_brain_mask.nii.gz
fsl_glm -i /corral-repl/utexas/poldracklab/openfmri/analyses/paper_analysis_Dec2012/data_prep//zstat_run2_add10000.nii.gz -d /corral-repl/utexas/poldracklab/openfmri/analyses/paper_analysis_Dec2012/ICA_smoothed_6mm//ica_run1_200comp/melodic_IC.nii.gz -o /corral-repl/utexas/poldracklab/openfmri/analyses/paper_analysis_Dec2012/ICA_smoothed_6mm//datarun2_icarun1_200comp.txt --demean -m /corral-repl/utexas/poldracklab/software_lonestar/fsl-5.0.1/data/standard/MNI152_T1_2mm_brain_mask.nii.gz
fsl_glm -i /corral-repl/utexas/poldracklab/openfmri/analyses/paper_analysis_Dec2012/data_prep//zstat_run1_add10000.nii.gz -d /corral-repl/utexas/poldracklab/openfmri/analyses/paper_analysis_Dec2012/ICA_smoothed_6mm//ica_run2_2comp/melodic_IC.nii.gz -o /corral-repl/utexas/poldracklab/openfmri/analyses/paper_analysis_Dec2012/ICA_smoothed_6mm//datarun1_icarun2_2comp.txt --demean -m /corral-repl/utexas/poldracklab/software_lonestar/fsl-5.0.1/data/standard/MNI152_T1_2mm_brain_mask.nii.gz
fsl_glm -i /corral-repl/utexas/poldracklab/openfmri/analyses/paper_analysis_Dec2012/data_prep//zstat_run1_add10000.nii.gz -d /corral-repl/utexas/poldracklab/openfmri/analyses/paper_analysis_Dec2012/ICA_smoothed_6mm//ica_run2_10comp/melodic_IC.nii.gz -o /corral-repl/utexas/poldracklab/openfmri/analyses/paper_analysis_Dec2012/ICA_smoothed_6mm//datarun1_icarun2_10comp.txt --demean -m /corral-repl/utexas/poldracklab/software_lonestar/fsl-5.0.1/data/standard/MNI152_T1_2mm_brain_mask.nii.gz
fsl_glm -i /corral-repl/utexas/poldracklab/openfmri/analyses/paper_analysis_Dec2012/data_prep//zstat_run1_add10000.nii.gz -d /corral-repl/utexas/poldracklab/openfmri/analyses/paper_analysis_Dec2012/ICA_smoothed_6mm//ica_run2_20comp/melodic_IC.nii.gz -o /corral-repl/utexas/poldracklab/openfmri/analyses/paper_analysis_Dec2012/ICA_smoothed_6mm//datarun1_icarun2_20comp.txt --demean -m /corral-repl/utexas/poldracklab/software_lonestar/fsl-5.0.1/data/standard/MNI152_T1_2mm_brain_mask.nii.gz
fsl_glm -i /corral-repl/utexas/poldracklab/openfmri/analyses/paper_analysis_Dec2012/data_prep//zstat_run1_add10000.nii.gz -d /corral-repl/utexas/poldracklab/openfmri/analyses/paper_analysis_Dec2012/ICA_smoothed_6mm//ica_run2_50comp/melodic_IC.nii.gz -o /corral-repl/utexas/poldracklab/openfmri/analyses/paper_analysis_Dec2012/ICA_smoothed_6mm//datarun1_icarun2_50comp.txt --demean -m /corral-repl/utexas/poldracklab/software_lonestar/fsl-5.0.1/data/standard/MNI152_T1_2mm_brain_mask.nii.gz
fsl_glm -i /corral-repl/utexas/poldracklab/openfmri/analyses/paper_analysis_Dec2012/data_prep//zstat_run1_add10000.nii.gz -d /corral-repl/utexas/poldracklab/openfmri/analyses/paper_analysis_Dec2012/ICA_smoothed_6mm//ica_run2_100comp/melodic_IC.nii.gz -o /corral-repl/utexas/poldracklab/openfmri/analyses/paper_analysis_Dec2012/ICA_smoothed_6mm//datarun1_icarun2_100comp.txt --demean -m /corral-repl/utexas/poldracklab/software_lonestar/fsl-5.0.1/data/standard/MNI152_T1_2mm_brain_mask.nii.gz
fsl_glm -i /corral-repl/utexas/poldracklab/openfmri/analyses/paper_analysis_Dec2012/data_prep//zstat_run1_add10000.nii.gz -d /corral-repl/utexas/poldracklab/openfmri/analyses/paper_analysis_Dec2012/ICA_smoothed_6mm//ica_run2_200comp/melodic_IC.nii.gz -o /corral-repl/utexas/poldracklab/openfmri/analyses/paper_analysis_Dec2012/ICA_smoothed_6mm//datarun1_icarun2_200comp.txt --demean -m /corral-repl/utexas/poldracklab/software_lonestar/fsl-5.0.1/data/standard/MNI152_T1_2mm_brain_mask.nii.gz
fsl_glm -i /corral-repl/utexas/poldracklab/openfmri/analyses/paper_analysis_Dec2012/data_prep//zstat_run2_add10000.nii.gz -d /corral-repl/utexas/poldracklab/openfmri/analyses/paper_analysis_Dec2012/ICA_smoothed_6mm//ica_run2_2comp/melodic_IC.nii.gz -o /corral-repl/utexas/poldracklab/openfmri/analyses/paper_analysis_Dec2012/ICA_smoothed_6mm//datarun2_icarun2_2comp.txt --demean -m /corral-repl/utexas/poldracklab/software_lonestar/fsl-5.0.1/data/standard/MNI152_T1_2mm_brain_mask.nii.gz
fsl_glm -i /corral-repl/utexas/poldracklab/openfmri/analyses/paper_analysis_Dec2012/data_prep//zstat_run2_add10000.nii.gz -d /corral-repl/utexas/poldracklab/openfmri/analyses/paper_analysis_Dec2012/ICA_smoothed_6mm//ica_run2_10comp/melodic_IC.nii.gz -o /corral-repl/utexas/poldracklab/openfmri/analyses/paper_analysis_Dec2012/ICA_smoothed_6mm//datarun2_icarun2_10comp.txt --demean -m /corral-repl/utexas/poldracklab/software_lonestar/fsl-5.0.1/data/standard/MNI152_T1_2mm_brain_mask.nii.gz
fsl_glm -i /corral-repl/utexas/poldracklab/openfmri/analyses/paper_analysis_Dec2012/data_prep//zstat_run2_add10000.nii.gz -d /corral-repl/utexas/poldracklab/openfmri/analyses/paper_analysis_Dec2012/ICA_smoothed_6mm//ica_run2_20comp/melodic_IC.nii.gz -o /corral-repl/utexas/poldracklab/openfmri/analyses/paper_analysis_Dec2012/ICA_smoothed_6mm//datarun2_icarun2_20comp.txt --demean -m /corral-repl/utexas/poldracklab/software_lonestar/fsl-5.0.1/data/standard/MNI152_T1_2mm_brain_mask.nii.gz
fsl_glm -i /corral-repl/utexas/poldracklab/openfmri/analyses/paper_analysis_Dec2012/data_prep//zstat_run2_add10000.nii.gz -d /corral-repl/utexas/poldracklab/openfmri/analyses/paper_analysis_Dec2012/ICA_smoothed_6mm//ica_run2_50comp/melodic_IC.nii.gz -o /corral-repl/utexas/poldracklab/openfmri/analyses/paper_analysis_Dec2012/ICA_smoothed_6mm//datarun2_icarun2_50comp.txt --demean -m /corral-repl/utexas/poldracklab/software_lonestar/fsl-5.0.1/data/standard/MNI152_T1_2mm_brain_mask.nii.gz
fsl_glm -i /corral-repl/utexas/poldracklab/openfmri/analyses/paper_analysis_Dec2012/data_prep//zstat_run2_add10000.nii.gz -d /corral-repl/utexas/poldracklab/openfmri/analyses/paper_analysis_Dec2012/ICA_smoothed_6mm//ica_run2_100comp/melodic_IC.nii.gz -o /corral-repl/utexas/poldracklab/openfmri/analyses/paper_analysis_Dec2012/ICA_smoothed_6mm//datarun2_icarun2_100comp.txt --demean -m /corral-repl/utexas/poldracklab/software_lonestar/fsl-5.0.1/data/standard/MNI152_T1_2mm_brain_mask.nii.gz
fsl_glm -i /corral-repl/utexas/poldracklab/openfmri/analyses/paper_analysis_Dec2012/data_prep//zstat_run2_add10000.nii.gz -d /corral-repl/utexas/poldracklab/openfmri/analyses/paper_analysis_Dec2012/ICA_smoothed_6mm//ica_run2_200comp/melodic_IC.nii.gz -o /corral-repl/utexas/poldracklab/openfmri/analyses/paper_analysis_Dec2012/ICA_smoothed_6mm//datarun2_icarun2_200comp.txt --demean -m /corral-repl/utexas/poldracklab/software_lonestar/fsl-5.0.1/data/standard/MNI152_T1_2mm_brain_mask.nii.gz
